2012 Drought Field Protocol

Drought Open-Source Ecology (DOSE) Main page

Thanks to those that helped refine this sample protocol!

Comments appreciated, especially as they pertain to clarifying this protocol or proposing new measurements for a later time.

Isotope page set up for methodologies to analyze d13C of NSC's as well as add connections to other isotope campaigns.

Documents

Plot selection

We recognize that many plots will occur at already-existing research sites to leverage pre-existing measurements, datasets, and logistics of measurement. If you will be making measurements at these already-selected sites, we ask that you provide some quick ancillary site information on the Datasheet Coversheet of what the site was selected for, how it was selected, known disturbance history, and any notable hydrological components (e.g. “a stream runs 5 m from plot on South/downhill side”).

If you will be selecting new sites to make measurements, we recommend the following guidelines for selecting plots. In general, avoid recent major stand disturbance (fire, windthrow, timber harvest, other human disturbance) and stand edges in selecting plots. We recommend a buffer (>30 m) from improved roads. Finally, within a given region that you are interested in, random selection of a plot center is ideal. This can quickly determined with a random number generator to generate a random compass bearing and random distance from a starting point to a plot center.

Kindly insert site coordinates here so we can keep track

Sampling Periods

Naturally, drought timing and peak severity will differ greatly across the US. We are working with the NLDAS2 modeling group to see about the possibility of generating “drought tracks” or weekly/monthly drought forecasts for US regions. We will be in touch as to whether this is possible or not. In the absence of these guiding forecasts, individual participants should use their best knowledge of their field system to pick sampling dates for each of the sampling period.

To best capture pre-drought conditions and physiology, drought stress, and post-drought effects, three sampling periods are needed. These are:

  1. Pre-peak drought stress 2012 (generally June 1-15, 2012)
  2. Peak drought stress 2012 (July 20 - Aug 15, 2012; as close as possible to peak stress)
  3. Follow-up/pre-stress 2013 (~1 year after Sampling Period 1)

Only a partial protocol (Step 2, below) is necessary in Sampling Period 3 (2013).

Overview on measurement outcomes and rationale

Drought-induced tree mortality is an important but poorly understood process in the terrestrial carbon cycle. We currently do not have a predictive model of drought-driven tree death across species or ecosystems, leading to substantial uncertainties the impacts of climate change on biodiversity, ecological communities, forestry, and the carbon cycle. In part, this is because drought research is typically carried out on individual sites and a handful of species. And in part, this is also because major regional droughts are, by nature, relatively rare, hard to anticipate, and hard to study during peak drought stress. Our goal in this research is to develop a broader perspective across sites and species and to step back and examine the broad view of what determines the vulnerability of a given tree to drought, with a goal of modeling mortality at larger spatial scales.

We want to acknowledge up front that there are many challenges in an effort like this. As the wealth of site-level drought physiology research shows, much of tree’s response to drought is context-dependent, depending on site and soil characteristics, biotic community attributes, drought characteristics, and antecedent conditions. This makes cross-species and cross-system comparisons difficult. Second, capturing this context-influenced and dynamic drought response in spot measurements at single points in time is often hard. Nonetheless, cross-site comparisons have been done successfully across sub-continental regions and the potential to draw upon the expertise and wealth of ongoing research on US forests during drought holds great promise.

Our guiding question in this research is: How do species identity and individual tree attributes, community and edaphic context, and drought characteristics affect the vulnerability of a tree to drought? More specifically, within a plot or region with similar drought conditions, is a given tree’s probability of death influenced by species identity, species traits associated with drought response such as wood density, community characteristics such as stand density, and soil characteristics such as soil texture? Across regions, how does mortality vary with drought duration, intensity, and order (e.g. spring drought followed by summer drought)? How do drought characteristics interact with individual, trait, species, community, and edaphic elements (e.g. is a short but intense drought hardest on species with lowest evidence of stomatal control or individuals on fine-textured soils)?

Thus, we have designed a short protocol to measure tree mortality, individual characteristics, some drought-relevant species traits, and soil characteristics. The first and most important component of measurement is determining who lived and who died – mortality for each species before, during, and after drought to compare with the USFS Forest Inventory and Analysis background mortality rate. Individual tree metrics indicate stress, biotic attack, and microclimate and competitive context. Soil gravimetric water content provides a snapshot of soil moisture and surface soil texture give a coarse indication of the water holding capacity of a site’s soils. While not perfect drought-response traits, wood density (correlate of embolism resistance). 13C of leaf sugars and starches (correlate of recent stomatal closure) are easy to sample species drought traits. A few other physiology measurements – notably pre-dawn and mid-day water potential – are highly encouraged but not included in the core protocol (see below).

Measurement Protocol

Aims: Simple and clear methods that are 1) comparable across observers and systems, 2) can be done by a single trained person in less than a day, 3) require minimal specialized equipment, and 4) drawn from and standardized with national monitoring protocols for forest health (Forest Health and Management (FHM) protocol).

Equipment Required

  • Plot stake (metal) & hammer
  • GPS
  • Compass
  • Data-sheet (provided)
  • Tape measure, DBH tape (optional/helpful but not required)
  • Plant clippers
  • Graduated cylinder
  • Pin or needle
  • Large Ziploc bags (4 + 3/species in plot)
  • Shovel or soil-corer
  • Cooler with ice

Methods after plot has been located

NOTE: The measurement protocol below is written for establishing a new plot for these measurements. If you will instead be making measurements in an already-established plot, skip Step 1a and 1c in “Methods.”

NOTE: Steps 3-7 (physiology measurements) are needed only for 2012 sampling periods. The 2013 sampling period should consist only of Step 2 (stand health and mortality).

Sampling Guidelines

  • Minimum 20 trees per plot (a tree is an individual with diameter at breast height > 0 cm)
  • 8 soil samples per plot (2 depths: 0-10 and 20-30 cm at 4 locations)
  • 3 leaf/needle samples per species (mid-low canopy, south side, sunlit leaves)
  • 3 branch samples per species (mid-low canopy, south side)

1. Mark the plot center and record plot attributes

  1. Drive in metal stake at the center of the plot. Make sure stake is adequately visible such that you can locate plot center one year later.
  2. Record brand, model, and datum (set to NAD83) of the GPS unit. Take GPS coordinates of plot center and note latitude (decimal degrees), longitude (decimal degrees), elevation (m), and aspect (degrees; determined via compass) on datasheet.
  3. Select an appropriate plot radius that includes a minimum of 20 trees that have a diameter at breast height > 5 cm. We recommend a default of 10 m radius, but other options include: 6.3 m, 8.8 m, 12.6 m, 17.8 m.
  4. Record notes on plot weather of the sampling day and previous 3-4 days (e.g. cloudiness, recent rainfall, nearest weather station if known, temperature or relative humidity if known).

2. Stand survey for tree health and attributes

  1. Starting with magnetic North, swing the tape measure with a distance of the selected radius from the center stake clockwise (towards East).
  2. For every tree (an individual with >0 cm Diameter at Breast Height – DBH) that falls “in” the plot (more than half of the tree's diameter lies within the radius from the center stake), note the following:
    1. Tree record number: sequential from beginning of plot
    2. Species per 4 letter code from FHM Appendix 3
    3. Diameter at Breast Height (DBH) – 1.37m – either via DBH tape or if you do not have access to a DBH tape, measure tree circumference and note that you measured circumferences
    4. Living or dead (0=Living, 1=Dead)
    5. Crown position (adapted from FHM – see DOSE Crown Guide for more details):
      • 1 = Super-story
      • 2 = Overstory
      • 3 = Understory
      • 4 = Open canopy
      • 5 = Sapling
    6. Crown dieback (from FHM: see DOSE Crown Guide for more details): Estimate as a percentage of the live crown area, including the dieback area. Assume the perimeter of the crown is a two-dimensional image outline from branch-tip to branch-tip, excluding snag branches and large holes/gaps in the crow. Estimate in bins of 5%, recording the upper bin (0 = 0%, 5 = 1-5%, 10 = 6-10%, etc). Avoid counting old dead branches at the bottom of the canopy.
    7. Visible recent biotic agent attack (0=No, 1=Yes): This covers notable and visible attacks from biotic agents that occurred within the last 5 years.
    8. Biotic agent species, if known
    9. Whether the tree was sampled for tissue samples (below)
    10. Any additional pertinent notes
    11. Mark the tree with a tag or flag to find the same tree later

3. Soil cores for gravimetric soil water and soil texture

  1. Locate 1 soil core at each of the cardinal directions (N, E, S, W) 2 meters from the plot center (locate an additional 1 m from plot center (3m total) for Sampling Period 2).
  2. At each soil core location, clear off the organic soil horizon (e.g. fallen leaves, twigs, bark).
  3. Using a shovel or soil corer/auger, dig down 10 cm. Take a representative slice of the exposed or exhumed soil that integrates from 0-10 cm in depth and is less than 1 L in volume (0.3L is ideal).
  4. Place instantly in Ziploc bag and seal tightly, squeezing out extra air. Label bag with Plot ID, depth, and cardinal direction (e.g. “PLOT B – 10CM – N”)
  5. Repeat steps 3c and 3d but for 20-30 cm depth (label Ziploc bag as PLOT ID – 30CM – DIRECTION)

4. Leaf sample for 13C of starches/sugars

  1. From up to 3 individuals per species in the plot, clip one leaf/needle sample of >5 leaves/needles.
  2. Place in Ziploc bag, label as “PLOT ID – SPP”, and place instantly in cold, dark cooler.
  3. Note sampled tree on data-sheet as “L” in the “Sampled type, volume” column.

5. Branch segment sample for wood density

  1. From up to 3 individuals per species in the plot, clip one branch sample of >10 cm length (0.5-1.5 cm diameter is ideal).
  2. Note sampled tree on data-sheet as “B” and proceed to next step.

6. Branch segment xylem volume (fresh volume required for wood density)

  1. Strip all bark from the branch sample.
  2. Fill graduated cylinder with enough water to submerge entire branch sample. Note water volume.
  3. Insert the pin or needle just barely into the tip of the stripped branch sample. Holding the pin/needle, submerge the branch sample into the graduated cylinder until the entire sample and only the sample (e.g. no pin) are covered in water. The top of the wood should be just below the meniscus avoiding immersing the needle. The wood should also not touch the sides of the cylinder. Record the branch volume next to the “B” in the “Sample type, volume” column on the datasheet.
  4. Place in Ziploc bag, label as “PLOT ID – SPP”, and place in cold, dark cooler.

7. Keep samples under ice until reaching drying oven

Processing:

  1. Weigh (wet) soil samples on a balance and note the sample’s weight and units of weight. Ensure that the Ziploc bag has not broken and that the sample was not exposed to air between sampling and weighing.
  2. Oven-dry branch and leaf samples at 65 C (150 F) until dry. Soil samples can be dried at hotter temperatures (e.g. 90-100 C) until dry. A well-ventilated oven will greatly speed up this process. Weigh dried soil samples and note weight. Place back into labeled Ziploc bags.
  3. Branch, leaf, and soil samples to:
    Bill Anderegg
    11611 Rd. 22
    Cortez, CO 81321
  4. Enter field data in Excel spreadsheet and save in the format “SURVEYORNAME_PLOTID_DATE”
  5. Email excel spreadsheet of field data to anderegg@stanford.edu

Highly desirable additional measurements/data (where possible)

These measurements can provide greater physiological insight and power, especially across systems, but often require specialized equipment or training and more time. If you are interested in measuring any these variables, we highly encourage doing so. Include these measurements in the “Notes” column (or add additional columns) in the datasheet so that measurements can be associated with the specific trees from which they came.

  1. Pre-dawn and midday plant water potential measurements (3 individuals per species) via pressure chamber
  2. Any additional soil data for the site (depth to bedrock, soil texture across depth, other soil moisture measurements)
  3. Measurement of Leaf Area Index at the plot center.
  4. Tree age or height for measured trees
  5. Branch hydraulic conductance and percent loss of conductivity (3 individuals per species)
dose/methods.txt · Last modified: 2012/06/08 13:43 by adamwolf
 
Recent changes RSS feed Donate Powered by PHP Valid XHTML 1.0 Valid CSS Driven by DokuWiki